BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A04SP1|AL430467
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1234 1124 0.0
>3x_Contig1234
Length = 5871
Score = 1124 bits (561), Expect = 0.0
Identities = 567/571 (99%)
Strand = Plus / Minus
Query: 343 caccatgaggacaagtaccgtatttyctttggtcgatgaaccagtagtatggagcagggt 402
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5852 caccatgaggacaagtacagtattttctttggtcgatgaaccagtagtatggagcagggt 5793
Query: 403 cgataccttcacgcttgamaccggccatcaattcttcagtgtcgtcgattctcatagaac 462
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5792 cgataccttcacgcttgaaaccggccatcaattcttcagtgtcgtcgattctcatagaac 5733
Query: 463 caccagtgatttcaccgacagttggcatcaagacgtcgacagattcggtaacacgtttgt 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5732 caccagtgatttcaccgacagttggcatcaagacgtcgacagattcggtaacacgtttgt 5673
Query: 523 cgtcgtcacaacgtttcatgtagaaagatttgatttccaatgggaatctagtcaaaagaa 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5672 cgtcgtcacaacgtttcatgtagaaagatttgatttccaatgggaatctagtcaaaagaa 5613
Query: 583 ttggaacaccgatggtgtcagtcatctttctttctgcagcttcagcgatatcgtcaccaa 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5612 ttggaacaccgatggtgtcagtcatctttctttctgcagcttcagcgatatcgtcaccaa 5553
Query: 643 attggaactctttatcttcctcgttcttaataccgtgttcttttaaccattcgatggcat 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5552 attggaactctttatcttcctcgttcttaataccgtgttcttttaaccattcgatggcat 5493
Query: 703 ccttgtactccattctcttgaaaggaagttgaggtgcttggaaattagggttcaatttct 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5492 ccttgtactccattctcttgaaaggaagttgaggtgcttggaaattagggttcaatttct 5433
Query: 763 tgaccaaaggaccagcaaccgggtcttctagcacgtattggatggtcttagtgatgacac 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5432 tgaccaaaggaccagcaaccgggtcttctagcacgtattggatggtcttagtgatgacac 5373
Query: 823 gttcgatgtgtgacaataaatcgtcaaagtccaagaaacacaattccgcttcgatatggg 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5372 gttcgatgtgtgacaataaatcgtcaaagtccaagaaacacaattccgcttcgatatggg 5313
Query: 883 tatattcggacawatgtcttcttgtatgaga 913
|||||||||||| ||||||||||||||||||
Sbjct: 5312 tatattcggacaaatgtcttcttgtatgaga 5282
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5155
Number of Sequences: 1807
Number of extensions: 5155
Number of successful extensions: 22
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)